STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBG_1318Putative ABC transporter ATP/GTP-binding protein. (382 aa)    
Predicted Functional Partners:
yehW_2
Putative ABC transporter membrane protein.
 0.999
yehW_1
Putative ABC transporter membrane protein.
 0.999
opuCC
Putative ABC transporter periplasmic binding protein.
 
 0.996
yehZ
Putative periplasmic protein.
 
 0.982
yehW
Putative permease transmembrane component.
 0.981
yehY
Putative permease transmembrane component.
 
 0.980
yehX
ABC transporter ATP-binding protein.
  
  
 
0.909
cydD
Transport ATP-binding protein CydD.
 
     
0.524
clcB_2
Putative voltage gated chloride channel protein.
       0.520
mdlB
Putative ABC transporter ATP-binding membrane protein.
 
     
0.472
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.