STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yehW_2Putative ABC transporter membrane protein. (215 aa)    
Predicted Functional Partners:
SBG_1318
Putative ABC transporter ATP/GTP-binding protein.
 0.999
opuCC
Putative ABC transporter periplasmic binding protein.
 
 0.999
yehZ
Putative periplasmic protein.
 
 0.999
yehX
ABC transporter ATP-binding protein.
 0.997
yehW_1
Putative ABC transporter membrane protein.
 
   
0.885
csdA_1
Putative aminotransferase.
      
 0.617
proV
Glycine betaine/L-proline transport ATP-binding protein.
  
 0.594
clcB_2
Putative voltage gated chloride channel protein.
       0.543
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.