STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rspAStarvation sensing protein RspA. (404 aa)    
Predicted Functional Partners:
por
Putative D-mannonate oxidoreductase; Belongs to the mannitol dehydrogenase family.
 
  
 0.979
uxuB
D-mannonate oxidoreductase; Belongs to the mannitol dehydrogenase family.
 
  
 0.935
uxaA
Altronate hydrolase.
 
  
 0.934
kduD
2-keto-3-deoxygluconate oxidoreductase.
  
  
 0.913
uxuA
D-mannonate hydrolase; Catalyzes the dehydration of D-mannonate.
    
 0.913
rspB
Starvation sensing protein RspB.
  
  
 0.892
kdgK
2-dehydro-3-deoxygluconokinase.
 
  
  0.886
gnd
6-phosphogluconate dehydrogenase,decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.
     
 0.800
rpiA
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
     
  0.800
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
     
  0.800
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.