STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
porPutative D-mannonate oxidoreductase; Belongs to the mannitol dehydrogenase family. (488 aa)    
Predicted Functional Partners:
rspA
Starvation sensing protein RspA.
 
  
 0.979
uxuA
D-mannonate hydrolase; Catalyzes the dehydration of D-mannonate.
 
 
 0.961
uxaC_5
Glucuronate isomerase; Also uxaC.
 
 
 0.944
uxaC_1
Glucoronate isomerase; Also uxaC.
 
 
 0.943
mtlA
Mannitol-specific enzyme II of phosphotransferase system.
  
  
 0.938
rspB
Starvation sensing protein RspB.
    
 0.937
uxuB
D-mannonate oxidoreductase; Belongs to the mannitol dehydrogenase family.
  
  
 
0.902
licR_4
Putative BglB-family transcriptional antiterminator.
  
  
 0.717
ydfH_1
Putative regulatory protein.
   
 0.614
fruB
Pts system, fructose-specific IIA/FPR component.
  
  
 0.590
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.