Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBG_0711 | SBG_1437 | SBG_0711 | SBG_1437 | Putative membrane protein. | Putative transferase. | 0.671 |
SBG_0711 | SBOV07181_1 | SBG_0711 | SBG_0671 | Putative membrane protein. | Putative pectin esterase precursor. | 0.667 |
SBG_0711 | rna | SBG_0711 | SBG_0525 | Putative membrane protein. | Ribonuclease I precursor; Belongs to the RNase T2 family. | 0.593 |
SBG_0711 | wcaC | SBG_0711 | SBG_1932 | Putative membrane protein. | Putative glycosyltransferase. | 0.452 |
SBG_0711 | yhjS | SBG_0711 | SBG_3216 | Putative membrane protein. | Conserved hypothetical protein. | 0.529 |
SBG_0711 | yjjQ | SBG_0711 | SBG_3960 | Putative membrane protein. | Conserved hypothetical regulatory protein. | 0.666 |
SBG_1437 | SBG_0711 | SBG_1437 | SBG_0711 | Putative transferase. | Putative membrane protein. | 0.671 |
SBG_1437 | SBG_2212 | SBG_1437 | SBG_2212 | Putative transferase. | Putative membrane protein. | 0.709 |
SBG_1437 | SBOV07181_1 | SBG_1437 | SBG_0671 | Putative transferase. | Putative pectin esterase precursor. | 0.774 |
SBG_1437 | damX | SBG_1437 | SBG_3092 | Putative transferase. | DamX protein. | 0.680 |
SBG_1437 | lpxA | SBG_1437 | SBG_0219 | Putative transferase. | acyl-[acyl-carrier-protein]:UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.701 |
SBG_1437 | rna | SBG_1437 | SBG_0525 | Putative transferase. | Ribonuclease I precursor; Belongs to the RNase T2 family. | 0.765 |
SBG_1437 | tehA | SBG_1437 | SBG_1436 | Putative transferase. | Tellurite resistance protein TehA. | 0.714 |
SBG_1437 | wcaC | SBG_1437 | SBG_1932 | Putative transferase. | Putative glycosyltransferase. | 0.751 |
SBG_1437 | yhjS | SBG_1437 | SBG_3216 | Putative transferase. | Conserved hypothetical protein. | 0.673 |
SBG_1437 | yjjQ | SBG_1437 | SBG_3960 | Putative transferase. | Conserved hypothetical regulatory protein. | 0.776 |
SBG_2212 | SBG_1437 | SBG_2212 | SBG_1437 | Putative membrane protein. | Putative transferase. | 0.709 |
SBG_2212 | SBOV07181_1 | SBG_2212 | SBG_0671 | Putative membrane protein. | Putative pectin esterase precursor. | 0.716 |
SBG_2212 | rna | SBG_2212 | SBG_0525 | Putative membrane protein. | Ribonuclease I precursor; Belongs to the RNase T2 family. | 0.527 |
SBG_2212 | tehA | SBG_2212 | SBG_1436 | Putative membrane protein. | Tellurite resistance protein TehA. | 0.432 |
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