STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smrAConserved hypothetical protein. (187 aa)    
Predicted Functional Partners:
exo
5'-3' exonuclease; Has flap endonuclease activity. During DNA replication, flap endonucleases cleave the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment.
      
 0.883
yfcN
Conserved hypothetical protein; Belongs to the UPF0115 family.
  
   
 0.491
SBOV17171
Conserved hypothetical protein.
  
     0.476
mdoB
Putative phosphoglycerol transferase.
  
     0.465
SBOV25411
Putative exported protein.
  
     0.449
yohC
Putative membrane protein.
  
     0.442
yojI
Putative ABC transporter ATP-binding protein.
  
     0.428
SBG_2427
Conserved hypothetical protein.
  
     0.421
ogt
O6-methylguanine-DNA-alkyltransferase.
       0.420
yieE
Conserved hypothetical protein.
  
     0.420
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.