STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG1Putative oxidoreductase. (237 aa)    
Predicted Functional Partners:
nuoC
NADH dehydrogenase I chain C; chain D; Belongs to the complex I 49 kDa subunit family.
   
 
 0.898
SBG_1517
Putative transcriptional regulator.
 
  
 0.877
SBG_2692
Conserved hypothetical protein; Belongs to the SprT family.
      
 0.832
fabD
Malonyl CoA-acyl carrier protein transacylase.
 
 
 0.491
SBOV46981
Conserved hypothetical protein.
  
     0.475
gutM
Glucitol operon activator protein.
  
    0.462
srlA
PTS system, glucitol/sorbitol-specific IIBC component.
  
    0.458
rbsK_3
Sugar Kinase; Belongs to the carbohydrate kinase PfkB family.
  
   0.451
entB
Isochorismatase.
  
  
 0.445
SBG_1475
Putative phosphatase; The.
  
 
 
 0.436
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.