STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBG_1663Conserved hypothetical protein. (510 aa)    
Predicted Functional Partners:
SBOV12751_1
Conserved hypothetical protein; Belongs to the UPF0229 family.
 
  
 0.994
SBG_1130
Conserved hypothetical protein.
 
  
 0.988
yehY
Putative permease transmembrane component.
   
  
 0.832
SBG_2427
Conserved hypothetical protein.
   
    0.539
phoH
PhoH protein (phosphate starvation-inducible protein PsiH).
   
    0.535
yohC
Putative membrane protein.
   
    0.533
uspB
Universal stress protein B.
   
  
 0.511
yhjY
Putative membrane protein.
      
 0.495
ygaU
Conserved hypothetical protein.
   
  
 0.492
afr
Putative oxidoreductase.
      
 0.470
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.