Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SBG_1663Conserved hypothetical protein. (510 aa)    
Predicted Functional Partners:
SBOV12751_1
Conserved hypothetical protein; Belongs to the UPF0229 family.
 
  
 0.993
SBG_1130
Conserved hypothetical protein.
 
  
 0.993
SBOV10341
Conserved hypothetical protein.
   
    0.600
yohC
Putative membrane protein.
   
    0.584
porB
Putative pyruvate-flavodoxin oxidoreductase.
   
  
 0.577
yehY
Putative permease transmembrane component.
   
  
 0.574
yodD
Conserved hypothetical protein.
   
    0.572
uspB
Universal stress protein B.
   
  
 0.561
SBG_2427
Conserved hypothetical protein.
   
    0.534
blc
Putative lipoprotein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.
   
    0.534
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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