STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slpPutative lipoprotein. (193 aa)    
Predicted Functional Partners:
tus
DNA replication terminus site-binding protein; DNA sequence-specific contrahelicase.
  
     0.668
yeaZ
Conserved hypothetical protein.
  
  
 0.646
ybaJ
Conserved hypothetical protein.
  
     0.644
SBG_1044
Putative lipoprotein.
  
     0.643
smg
Conserved hypothetical protein; Belongs to the Smg family.
  
     0.610
ynfB
Putative secreted protein; Belongs to the UPF0482 family.
  
   
 0.601
SBG_1710
Putative exported protein.
  
     0.581
bssS
Conserved hypothetical protein.
  
     0.577
mzrA
Putative exported protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
  
     0.559
sseB
SseB protein.
  
     0.518
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.