Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| arcB | nlpI | SBG_2958 | SBG_2911 | Aerobic respiration control sensor protein. | Conserved hypothetical protein; May be involved in cell division. | 0.518 |
| arcB | porB | SBG_2958 | SBG_1488 | Aerobic respiration control sensor protein. | Putative pyruvate-flavodoxin oxidoreductase. | 0.833 |
| arcB | prc | SBG_2958 | SBG_1699 | Aerobic respiration control sensor protein. | Tail-specific protease precursor; Belongs to the peptidase S41A family. | 0.480 |
| arcB | proQ | SBG_2958 | SBG_1700 | Aerobic respiration control sensor protein. | ProP effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an RNA-based, post-transcriptional mechanism. Belongs to the ProQ family. | 0.589 |
| arcB | yebU | SBG_2958 | SBG_1704 | Aerobic respiration control sensor protein. | rRNA (cytosine-C(5)-)-methyltransferase; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | 0.449 |
| envC_1 | prc | SBG_3287 | SBG_1699 | Conserved hypothetical protein. | Tail-specific protease precursor; Belongs to the peptidase S41A family. | 0.530 |
| nlpI | arcB | SBG_2911 | SBG_2958 | Conserved hypothetical protein; May be involved in cell division. | Aerobic respiration control sensor protein. | 0.518 |
| nlpI | prc | SBG_2911 | SBG_1699 | Conserved hypothetical protein; May be involved in cell division. | Tail-specific protease precursor; Belongs to the peptidase S41A family. | 0.903 |
| nlpI | proQ | SBG_2911 | SBG_1700 | Conserved hypothetical protein; May be involved in cell division. | ProP effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an RNA-based, post-transcriptional mechanism. Belongs to the ProQ family. | 0.757 |
| pheT | prc | SBG_1190 | SBG_1699 | phenylalanyl-tRNA synthetase beta chain. | Tail-specific protease precursor; Belongs to the peptidase S41A family. | 0.448 |
| pheT | yebU | SBG_1190 | SBG_1704 | phenylalanyl-tRNA synthetase beta chain. | rRNA (cytosine-C(5)-)-methyltransferase; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | 0.514 |
| porB | arcB | SBG_1488 | SBG_2958 | Putative pyruvate-flavodoxin oxidoreductase. | Aerobic respiration control sensor protein. | 0.833 |
| porB | prc | SBG_1488 | SBG_1699 | Putative pyruvate-flavodoxin oxidoreductase. | Tail-specific protease precursor; Belongs to the peptidase S41A family. | 0.701 |
| prc | arcB | SBG_1699 | SBG_2958 | Tail-specific protease precursor; Belongs to the peptidase S41A family. | Aerobic respiration control sensor protein. | 0.480 |
| prc | envC_1 | SBG_1699 | SBG_3287 | Tail-specific protease precursor; Belongs to the peptidase S41A family. | Conserved hypothetical protein. | 0.530 |
| prc | nlpI | SBG_1699 | SBG_2911 | Tail-specific protease precursor; Belongs to the peptidase S41A family. | Conserved hypothetical protein; May be involved in cell division. | 0.903 |
| prc | pheT | SBG_1699 | SBG_1190 | Tail-specific protease precursor; Belongs to the peptidase S41A family. | phenylalanyl-tRNA synthetase beta chain. | 0.448 |
| prc | porB | SBG_1699 | SBG_1488 | Tail-specific protease precursor; Belongs to the peptidase S41A family. | Putative pyruvate-flavodoxin oxidoreductase. | 0.701 |
| prc | proQ | SBG_1699 | SBG_1700 | Tail-specific protease precursor; Belongs to the peptidase S41A family. | ProP effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an RNA-based, post-transcriptional mechanism. Belongs to the ProQ family. | 0.828 |
| prc | tnpA | SBG_1699 | SBG_1698 | Tail-specific protease precursor; Belongs to the peptidase S41A family. | Transposase for insertion sequence element IS200. | 0.458 |
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