STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yebGConserved hypothetical protein. (96 aa)    
Predicted Functional Partners:
yebF
Putative exported protein.
  
    0.767
sulA
Cell division inhibitor; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.
   
    0.742
tyrA
Chorismate mutase/prephenate dehydrogenase.
  
     0.659
ybfE
Conserved hypothetical protein.
  
   
 0.601
lexA
LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response).
   
  
 0.582
umuD
DNA repair protein; Belongs to the peptidase S24 family.
   
  
 0.563
yihG
Putative acyltransferase.
  
     0.540
purT
Phosphoribosylglycinamide formyltransferase 2.
       0.532
sbmC
Putative DNA gyrase inhibitory protein.
   
  
 0.532
fsr
Fosmidomycin resistance protein.
      
 0.527
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.