STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yebLHigh-affinity zinc uptake system periplasmic binding protein. (319 aa)    
Predicted Functional Partners:
znuC
High-affinity zinc uptake system ATP-binding protein.
 
 
 0.999
yebI
High-affinity zinc uptake system membrane protein.
 
 
 0.999
yebA
Conserved hypothetical protein.
  
  
 0.891
zupT
Putative membrane protein.
     
 0.843
zinT
Conserved hypothetical protein.
 
  
 0.835
sitD
Iron transport protein, inner membrane component.
 
  
 0.805
sitB
Iron transport protein, ATP-binding component.
 
  
 0.798
sitC
Iron transport protein, inner membrane component.
 
  
 0.784
zntB
Putative membrane transport protein; Mediates efflux of zinc ions; Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
  
   
 0.572
zur
Zinc uptake regulation protein; Belongs to the Fur family.
 
  
 0.541
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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