STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yecHConserved hypothetical protein. (79 aa)    
Predicted Functional Partners:
ysdC
Conserved hypothetical protein.
      
 0.882
SBG_1267
Conserved hypothetical protein.
      
 0.832
yeaR_2
Conserved hypothetical protein.
  
     0.728
yjeH
Putative permease.
  
     0.646
yeaR_1
Conserved hypothetical protein.
  
     0.588
ycdZ
Putative membrane protein.
  
     0.582
tyrP
Tyrosine-specific transport protein.
 
     0.577
SBG_0513
Conserved hypothetical protein.
  
     0.573
hybE
Hydrogenase-2 component protein.
  
     0.552
zraP
Putative exported protein; Binds zinc. Could be an important component of the zinc- balancing mechanism; Belongs to the ZraP family.
  
     0.543
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.