STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdiACell-division regulatory protein. (240 aa)    
Predicted Functional Partners:
sirA
Invasion response-regulator.
  
 0.931
yjjQ
Conserved hypothetical regulatory protein.
  
 
 0.602
SBG_0411
Conserved hypothetical lipoprotein.
  
     0.585
yhjS
Conserved hypothetical protein.
  
     0.516
SBG_3168
Putative membrane protein.
  
     0.484
SBOV07181_1
Putative pectin esterase precursor.
  
     0.470
yibL
Conserved hypothetical protein.
  
     0.460
artM_1
Putative ABC-transport ATP-binding protein.
       0.458
yecS
Putative ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
       0.458
dcyD_2
Putative deaminase.
       0.427
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.