Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SBG_1182 | fliK | SBG_1182 | SBG_1802 | Putative outer membrane protein. | Flagellar hook-length control protein. | 0.625 |
| SBG_1182 | fliT | SBG_1182 | SBG_1791 | Putative outer membrane protein. | Flagellar protein FliT; Dual-function protein that regulates the transcription of class 2 flagellar operons and that also acts as an export chaperone for the filament-capping protein FliD. As a transcriptional regulator, acts as an anti-FlhDC factor; it directly binds FlhC, thus inhibiting the binding of the FlhC/FlhD complex to class 2 promoters, resulting in decreased expression of class 2 flagellar operons. As a chaperone, effects FliD transition to the membrane by preventing its premature polymerization, and by directing it to the export apparatus. | 0.710 |
| SBG_1182 | srfA | SBG_1182 | SBG_1417 | Putative outer membrane protein. | Putative virulence effector protein. | 0.707 |
| SBG_1182 | srfB | SBG_1182 | SBG_1418 | Putative outer membrane protein. | Putative virulence effector protein. | 0.535 |
| SBG_1182 | srfC | SBG_1182 | SBG_1419 | Putative outer membrane protein. | Putative virulence effector protein. | 0.721 |
| SBG_1182 | ttrC | SBG_1182 | SBG_1223 | Putative outer membrane protein. | Tetrathionate reductase subunit C (membrane protein). | 0.742 |
| flgN | fliD | SBG_1009 | SBG_1789 | Flagella synthesis protein FlgN. | Flagellar hook associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.981 |
| flgN | fliK | SBG_1009 | SBG_1802 | Flagella synthesis protein FlgN. | Flagellar hook-length control protein. | 0.961 |
| flgN | fliS | SBG_1009 | SBG_1790 | Flagella synthesis protein FlgN. | Flagellar protein FliS. | 0.978 |
| flgN | fliT | SBG_1009 | SBG_1791 | Flagella synthesis protein FlgN. | Flagellar protein FliT; Dual-function protein that regulates the transcription of class 2 flagellar operons and that also acts as an export chaperone for the filament-capping protein FliD. As a transcriptional regulator, acts as an anti-FlhDC factor; it directly binds FlhC, thus inhibiting the binding of the FlhC/FlhD complex to class 2 promoters, resulting in decreased expression of class 2 flagellar operons. As a chaperone, effects FliD transition to the membrane by preventing its premature polymerization, and by directing it to the export apparatus. | 0.735 |
| flgN | srfA | SBG_1009 | SBG_1417 | Flagella synthesis protein FlgN. | Putative virulence effector protein. | 0.716 |
| flgN | srfB | SBG_1009 | SBG_1418 | Flagella synthesis protein FlgN. | Putative virulence effector protein. | 0.680 |
| flgN | srfC | SBG_1009 | SBG_1419 | Flagella synthesis protein FlgN. | Putative virulence effector protein. | 0.704 |
| fliD | flgN | SBG_1789 | SBG_1009 | Flagellar hook associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagella synthesis protein FlgN. | 0.981 |
| fliD | fliK | SBG_1789 | SBG_1802 | Flagellar hook associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-length control protein. | 0.985 |
| fliD | fliS | SBG_1789 | SBG_1790 | Flagellar hook associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar protein FliS. | 0.999 |
| fliD | fliT | SBG_1789 | SBG_1791 | Flagellar hook associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar protein FliT; Dual-function protein that regulates the transcription of class 2 flagellar operons and that also acts as an export chaperone for the filament-capping protein FliD. As a transcriptional regulator, acts as an anti-FlhDC factor; it directly binds FlhC, thus inhibiting the binding of the FlhC/FlhD complex to class 2 promoters, resulting in decreased expression of class 2 flagellar operons. As a chaperone, effects FliD transition to the membrane by preventing its premature polymerization, and by directing it to the export apparatus. | 0.939 |
| fliK | SBG_1182 | SBG_1802 | SBG_1182 | Flagellar hook-length control protein. | Putative outer membrane protein. | 0.625 |
| fliK | flgN | SBG_1802 | SBG_1009 | Flagellar hook-length control protein. | Flagella synthesis protein FlgN. | 0.961 |
| fliK | fliD | SBG_1802 | SBG_1789 | Flagellar hook-length control protein. | Flagellar hook associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.985 |
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