STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ulaA_2Putative membrane permease. (420 aa)    
Predicted Functional Partners:
ulaB_1
PTS-family membrane transport protein, component IIB.
 
 
 0.993
cmtB_2
PTS-family membrane transport protein, component IICD.
 
 
 0.993
ulaC_1
Putative sugar phosphotransferase component II A.
 
 
 0.982
SBG_2129
Putative sugar phosphotransferase component II B.
 
 
 0.964
sgaA
Putative sugar phosphotransferase.
 
 
 0.955
yjfR
Conserved hypothetical protein.
 
 
 0.934
ptsH
Phosphocarrier protein HPr.
    
  0.901
sgaB
Putative PTS system IIB protein.
 
 0.872
SBG_0780
Putative phosphotransferase enzyme II, B component.
  
 
 0.834
ulaC_2
Putative phosphotransferase enzyme.
 
  
 0.815
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.