Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBG_1437 | SBOV07181_1 | SBG_1437 | SBG_0671 | Putative transferase. | Putative pectin esterase precursor. | 0.774 |
SBG_1437 | bscC | SBG_1437 | SBG_3211 | Putative transferase. | Cellulose biosynthesis protein subunit C. | 0.501 |
SBG_1437 | dcuC | SBG_1437 | SBG_0535 | Putative transferase. | C4-dicarboxylate anaerobic carrier. | 0.477 |
SBG_1437 | hslJ | SBG_1437 | SBG_1485 | Putative transferase. | Heat shock protein. | 0.635 |
SBG_1437 | malM | SBG_1437 | SBG_3677 | Putative transferase. | Maltose operon periplasmic protein. | 0.668 |
SBG_1437 | sbmC | SBG_1437 | SBG_1885 | Putative transferase. | Putative DNA gyrase inhibitory protein. | 0.669 |
SBG_1437 | ybfM | SBG_1437 | SBG_0577 | Putative transferase. | Putative outer membrane protein. | 0.441 |
SBG_1437 | yhjS | SBG_1437 | SBG_3216 | Putative transferase. | Conserved hypothetical protein. | 0.673 |
SBG_1437 | yjjQ | SBG_1437 | SBG_3960 | Putative transferase. | Conserved hypothetical regulatory protein. | 0.776 |
SBOV07181_1 | SBG_1437 | SBG_0671 | SBG_1437 | Putative pectin esterase precursor. | Putative transferase. | 0.774 |
SBOV07181_1 | bscC | SBG_0671 | SBG_3211 | Putative pectin esterase precursor. | Cellulose biosynthesis protein subunit C. | 0.548 |
SBOV07181_1 | dcuC | SBG_0671 | SBG_0535 | Putative pectin esterase precursor. | C4-dicarboxylate anaerobic carrier. | 0.582 |
SBOV07181_1 | hslJ | SBG_0671 | SBG_1485 | Putative pectin esterase precursor. | Heat shock protein. | 0.697 |
SBOV07181_1 | malM | SBG_0671 | SBG_3677 | Putative pectin esterase precursor. | Maltose operon periplasmic protein. | 0.704 |
SBOV07181_1 | sbmC | SBG_0671 | SBG_1885 | Putative pectin esterase precursor. | Putative DNA gyrase inhibitory protein. | 0.735 |
SBOV07181_1 | ybfM | SBG_0671 | SBG_0577 | Putative pectin esterase precursor. | Putative outer membrane protein. | 0.413 |
SBOV07181_1 | yhjS | SBG_0671 | SBG_3216 | Putative pectin esterase precursor. | Conserved hypothetical protein. | 0.732 |
SBOV07181_1 | yjjQ | SBG_0671 | SBG_3960 | Putative pectin esterase precursor. | Conserved hypothetical regulatory protein. | 0.774 |
bscC | SBG_1437 | SBG_3211 | SBG_1437 | Cellulose biosynthesis protein subunit C. | Putative transferase. | 0.501 |
bscC | SBOV07181_1 | SBG_3211 | SBG_0671 | Cellulose biosynthesis protein subunit C. | Putative pectin esterase precursor. | 0.548 |
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