Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
gnd6-phosphogluconate dehydrogenase,decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family. (468 aa)    
Predicted Functional Partners:
zwf
Glucose 6-phosphate dehydrogenase.
 
 0.994
gntK
Putative gluconokinase.
  
 0.993
idnK
Thermosensitive gluconokinase.
  
 0.993
rpiA
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
  
 
 0.941
ybhE
Conserved hypothetical protein.
 
  
 0.940
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
   
 0.931
edd
6-phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
   
 0.927
galF
UTP-glucose-1-phosphate uridylyltransferase.
  
  
 0.863
kduD
2-keto-3-deoxygluconate oxidoreductase.
  
  0.811
araB
L-ribulokinase.
     
  0.800
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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