Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
baeSPutative two-component system sensor kinase. (467 aa)    
Predicted Functional Partners:
baeR
Putative two-component system response regulator.
 
 0.999
arcB
Aerobic respiration control sensor protein.
  
 
 0.909
SBG_1946
Putative efflux system protein.
  
  
 0.907
yegN
Putative RND-family transporter protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtB subfamily.
  
  
 0.893
yegB
Putative transporter protein.
   
 
 0.885
mdtC_1
Putative RND-family transporter protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  
 0.874
torS
Two-component sensor protein histidine protein kinase.
 
 
 
0.869
ttrS
TtrS protein.
   
 
 0.864
cheV
Putative receptor/regulator protein.
  
 
 0.740
cpxR
Two-component response regulatory protein.
 
 
 0.720
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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