STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
baeSPutative two-component system sensor kinase. (467 aa)    
Predicted Functional Partners:
baeR
Putative two-component system response regulator.
 0.999
arcB
Aerobic respiration control sensor protein.
 
0.954
SBG_1946
Putative efflux system protein.
  
  
 0.947
yegN
Putative RND-family transporter protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtB subfamily.
  
  
 0.908
yegB
Putative transporter protein.
   
 
 0.907
mdtC_1
Putative RND-family transporter protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  
 0.901
torS
Two-component sensor protein histidine protein kinase.
 
0.840
yegE
Putative membrane protein.
  
 
 0.780
cpxR
Two-component response regulatory protein.
 
 0.774
copR
Response regulator.
 
 0.766
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.