STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
metGmethionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (677 aa)    
Predicted Functional Partners:
leuS
leucyl-tRNA synthetase.
  
 0.984
proS
prolyl-tRNA synthetase.
  
 0.976
argS
arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.975
pheS
phenylalanyl-tRNA synthetase alpha chain.
  
 
 0.966
ileS
isoleucyl-tRNA synthetase.
  
 0.965
asnS
asparaginyl-tRNA synthetase.
  
 0.965
lysS
Lysyl tRNA synthetase (LysRS); Belongs to the class-II aminoacyl-tRNA synthetase family.
 
 0.956
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.945
purL
Phosphoribosylformylglycineamide synthetase.
 
  
 0.944
pheT
phenylalanyl-tRNA synthetase beta chain.
  
  
 0.931
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.