Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
bscA | csgA | SBG_3214 | SBG_0982 | Cellulose biosynthesis protein catalytic subunit A; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. | Major curlin subunit precursor. | 0.833 |
bscA | csgD | SBG_3214 | SBG_0980 | Cellulose biosynthesis protein catalytic subunit A; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. | Putative regulatory protein. | 0.875 |
bscA | gmr_4 | SBG_3214 | SBG_1565 | Cellulose biosynthesis protein catalytic subunit A; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. | Conserved hypothetical protein. | 0.689 |
bscA | ycdT_1 | SBG_3214 | SBG_1813 | Cellulose biosynthesis protein catalytic subunit A; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. | Putative membrane protein. | 0.849 |
bscA | yegE | SBG_3214 | SBG_1942 | Cellulose biosynthesis protein catalytic subunit A; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. | Putative membrane protein. | 0.942 |
bscA | yehV | SBG_3214 | SBG_1973 | Cellulose biosynthesis protein catalytic subunit A; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. | Putative transcriptional regulator. | 0.830 |
bscA | yhjH | SBG_3214 | SBG_3206 | Cellulose biosynthesis protein catalytic subunit A; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. | Conserved hypothetical protein. | 0.836 |
csgA | bscA | SBG_0982 | SBG_3214 | Major curlin subunit precursor. | Cellulose biosynthesis protein catalytic subunit A; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. | 0.833 |
csgA | csgD | SBG_0982 | SBG_0980 | Major curlin subunit precursor. | Putative regulatory protein. | 0.906 |
csgA | rpoS | SBG_0982 | SBG_2538 | Major curlin subunit precursor. | RNA polymerase sigma subunit RpoS (sigma-38); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.520 |
csgA | yehV | SBG_0982 | SBG_1973 | Major curlin subunit precursor. | Putative transcriptional regulator. | 0.689 |
csgD | bscA | SBG_0980 | SBG_3214 | Putative regulatory protein. | Cellulose biosynthesis protein catalytic subunit A; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. | 0.875 |
csgD | csgA | SBG_0980 | SBG_0982 | Putative regulatory protein. | Major curlin subunit precursor. | 0.906 |
csgD | gmr_4 | SBG_0980 | SBG_1565 | Putative regulatory protein. | Conserved hypothetical protein. | 0.670 |
csgD | rpoS | SBG_0980 | SBG_2538 | Putative regulatory protein. | RNA polymerase sigma subunit RpoS (sigma-38); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.833 |
csgD | ycdT_1 | SBG_0980 | SBG_1813 | Putative regulatory protein. | Putative membrane protein. | 0.860 |
csgD | yegE | SBG_0980 | SBG_1942 | Putative regulatory protein. | Putative membrane protein. | 0.812 |
csgD | yehV | SBG_0980 | SBG_1973 | Putative regulatory protein. | Putative transcriptional regulator. | 0.883 |
csgD | yhjH | SBG_0980 | SBG_3206 | Putative regulatory protein. | Conserved hypothetical protein. | 0.501 |
gmr_4 | bscA | SBG_1565 | SBG_3214 | Conserved hypothetical protein. | Cellulose biosynthesis protein catalytic subunit A; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. | 0.689 |
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