STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycgMFAA-hydrolase-family protein. (233 aa)    
Predicted Functional Partners:
SBG_1988
glutathione-S-transferase-family protein.
 
 
 0.990
SBG_1990
Putative gentisate 1,2-dioxygenase.
 
   
 0.838
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 0.825
sdhA
Succinate dehydrogenase flavoprotein subunit.
  
 
  0.817
frdA
Fumarate reductase, flavoprotein subunit.
  
 
  0.817
mhbM_1
Putative n-hydroxybenzoate hydroxylase.
 
  
 0.815
sdhB
Succinate dehydrogenase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
  0.805
frdB
Fumarate reductase, iron-sulfur protein.
  
 
  0.805
sdhD
Succinate dehydrogenase hydrophobic membrane anchor protein.
   
 
  0.803
sdhC
Succinate dehydrogenase cytochrome b-556 subunit.
   
 
  0.802
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.