Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| fdoG | fdoH | SBG_3550 | SBG_3549 | Formate dehydrogenase-O, major subunit; Carries a UGA stop codon which is readthrough as an opal codon by the selenocysteine tRNA. | Formate dehydrogenase-O beta subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. | 0.997 |
| fdoG | fdoI | SBG_3550 | SBG_3548 | Formate dehydrogenase-O, major subunit; Carries a UGA stop codon which is readthrough as an opal codon by the selenocysteine tRNA. | Formate dehydrogenase-O gamma subunit. | 0.998 |
| fdoG | yeiG | SBG_3550 | SBG_2007 | Formate dehydrogenase-O, major subunit; Carries a UGA stop codon which is readthrough as an opal codon by the selenocysteine tRNA. | Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.900 |
| fdoH | fdoG | SBG_3549 | SBG_3550 | Formate dehydrogenase-O beta subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. | Formate dehydrogenase-O, major subunit; Carries a UGA stop codon which is readthrough as an opal codon by the selenocysteine tRNA. | 0.997 |
| fdoH | fdoI | SBG_3549 | SBG_3548 | Formate dehydrogenase-O beta subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. | Formate dehydrogenase-O gamma subunit. | 0.999 |
| fdoH | yeiG | SBG_3549 | SBG_2007 | Formate dehydrogenase-O beta subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. | Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.900 |
| fdoI | fdoG | SBG_3548 | SBG_3550 | Formate dehydrogenase-O gamma subunit. | Formate dehydrogenase-O, major subunit; Carries a UGA stop codon which is readthrough as an opal codon by the selenocysteine tRNA. | 0.998 |
| fdoI | fdoH | SBG_3548 | SBG_3549 | Formate dehydrogenase-O gamma subunit. | Formate dehydrogenase-O beta subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. | 0.999 |
| fdoI | yeiG | SBG_3548 | SBG_2007 | Formate dehydrogenase-O gamma subunit. | Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.900 |
| folE | yeiG | SBG_2005 | SBG_2007 | GTP cyclohydrolase I. | Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.430 |
| frmA_2 | frmR | SBG_1455 | SBG_1456 | Alcohol dehydrogenase class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | Conserved hypothetical protein. | 0.933 |
| frmA_2 | yeiG | SBG_1455 | SBG_2007 | Alcohol dehydrogenase class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.999 |
| frmR | frmA_2 | SBG_1456 | SBG_1455 | Conserved hypothetical protein. | Alcohol dehydrogenase class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | 0.933 |
| frmR | yeiG | SBG_1456 | SBG_2007 | Conserved hypothetical protein. | Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.655 |
| ybdR | yeiG | SBG_0523 | SBG_2007 | Hypothetical zinc-dependant alcohol dehydrogenase. | Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.561 |
| yeiG | fdoG | SBG_2007 | SBG_3550 | Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde. | Formate dehydrogenase-O, major subunit; Carries a UGA stop codon which is readthrough as an opal codon by the selenocysteine tRNA. | 0.900 |
| yeiG | fdoH | SBG_2007 | SBG_3549 | Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde. | Formate dehydrogenase-O beta subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. | 0.900 |
| yeiG | fdoI | SBG_2007 | SBG_3548 | Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde. | Formate dehydrogenase-O gamma subunit. | 0.900 |
| yeiG | folE | SBG_2007 | SBG_2005 | Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde. | GTP cyclohydrolase I. | 0.430 |
| yeiG | frmA_2 | SBG_2007 | SBG_1455 | Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde. | Alcohol dehydrogenase class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | 0.999 |
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