STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yeiEPutative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (287 aa)    
Predicted Functional Partners:
yeiH
Putative membrane protein; Belongs to the UPF0324 family.
 
   
 0.785
abgR
Putative LysR-family transcriptional regulatory protein; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon.
  
     0.749
lysP
Lysine-specific permease.
       0.527
dmlR_6
Putative lysR-family transcriptional regulatory protein.
  
     0.496
allS_2
Hypothetical lysR-family transcriptional regulator.
  
   
 0.476
dmlR_7
Putative LysR-family transcriptional regulatory protein.
  
     0.452
gcvA
Regulatory protein for glycine cleavage pathway.
  
     0.439
ydhB
Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
   
 0.430
qseD
Putative transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.419
allS_4
Putative transcriptional regulator.
  
   
 0.408
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.