STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yeiOSugar efflux transporter. (393 aa)    
Predicted Functional Partners:
ydgH_2
Putative exported protein.
  
     0.625
SBOV32171
Conserved hypothetical protein.
      
 0.617
SBG_2980
Conserved hypothetical protein.
  
     0.585
cnu
Conserved hypothetical protein.
  
     0.513
lpoB_1
Putative lipoprotein.
  
     0.477
yadI
Putative PTS system IIA component.
      
 0.468
damX
DamX protein.
  
   
 0.460
mzrA
Putative exported protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
  
     0.446
ompC
Outer membrane protein C; Belongs to the Gram-negative porin family.
  
     0.440
emrA
Multidrug resistance protein A.
  
 
 0.431
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.