STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
napCCytochrome c-type protein NapC. (200 aa)    
Predicted Functional Partners:
napB
Cytochrome c-type protein NapB precursor; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
 
  
 0.999
napH
Ferredoxin-type protein NapH.
 
 
 0.992
napG
Ferredoxin-type protein NapG.
 
  
 0.989
napA
Putative nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.975
napF
Ferredoxin-type protein NapF.
 
  
 0.923
napD
Putative napAB assembly protein.
 
  
 0.893
ccmB2
Heme exporter protein B1; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.
 
    0.826
ccmA2
Heme exporter protein A2; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
 
  
 0.809
torA
trimethylamine-N-oxide reductase precursor; Also significantly similar to SBG2024 56% identity in 824 aa overlap.
 
 
 0.735
torA2
trimethylamine-N-oxide reductase 1 precursor; Also significantly similar to SBG3383 56% identity in 824 aa overlap; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.677
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.