Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SBG_1527 | SBG_1839 | SBG_1527 | SBG_1839 | Putative oxidoreductase (pseudogene); The CDS carries a frameshift mutation and has undergone a deletion removing the 5' end of the gene. | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | 0.690 |
| SBG_1527 | gltC | SBG_1527 | SBG_2075 | Putative oxidoreductase (pseudogene); The CDS carries a frameshift mutation and has undergone a deletion removing the 5' end of the gene. | Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.692 |
| SBG_1527 | lrhA | SBG_1527 | SBG_2115 | Putative oxidoreductase (pseudogene); The CDS carries a frameshift mutation and has undergone a deletion removing the 5' end of the gene. | NADH dehydrogenase operon transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.479 |
| SBG_1527 | tdcA | SBG_1527 | SBG_2882 | Putative oxidoreductase (pseudogene); The CDS carries a frameshift mutation and has undergone a deletion removing the 5' end of the gene. | TDC operon transcriptional activator; Belongs to the LysR transcriptional regulatory family. | 0.473 |
| SBG_1839 | SBG_1527 | SBG_1839 | SBG_1527 | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | Putative oxidoreductase (pseudogene); The CDS carries a frameshift mutation and has undergone a deletion removing the 5' end of the gene. | 0.690 |
| SBG_1839 | allS_2 | SBG_1839 | SBG_2666 | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | Hypothetical lysR-family transcriptional regulator. | 0.693 |
| SBG_1839 | cysL | SBG_1839 | SBG_2526 | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.748 |
| SBG_1839 | dmlR_3 | SBG_1839 | SBG_1874 | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | Putative LysR-family transcriptional regulatory protein. | 0.742 |
| SBG_1839 | gltC | SBG_1839 | SBG_2075 | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.755 |
| SBG_1839 | lrhA | SBG_1839 | SBG_2115 | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | NADH dehydrogenase operon transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.737 |
| SBG_1839 | tdcA | SBG_1839 | SBG_2882 | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | TDC operon transcriptional activator; Belongs to the LysR transcriptional regulatory family. | 0.709 |
| SBG_1839 | yhjC | SBG_1839 | SBG_3202 | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | Hypothetical lysR-family transcriptional regulator. | 0.735 |
| SBG_2074 | gltC | SBG_2074 | SBG_2075 | Putative transmembrane transport protein. | Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.667 |
| allS_2 | SBG_1839 | SBG_2666 | SBG_1839 | Hypothetical lysR-family transcriptional regulator. | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | 0.693 |
| allS_2 | catM | SBG_2666 | SBG_0582 | Hypothetical lysR-family transcriptional regulator. | lysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.663 |
| allS_2 | gltC | SBG_2666 | SBG_2075 | Hypothetical lysR-family transcriptional regulator. | Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.613 |
| allS_2 | tdcA | SBG_2666 | SBG_2882 | Hypothetical lysR-family transcriptional regulator. | TDC operon transcriptional activator; Belongs to the LysR transcriptional regulatory family. | 0.718 |
| catM | allS_2 | SBG_0582 | SBG_2666 | lysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Hypothetical lysR-family transcriptional regulator. | 0.663 |
| catM | gltC | SBG_0582 | SBG_2075 | lysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.718 |
| cysL | SBG_1839 | SBG_2526 | SBG_1839 | Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | 0.748 |
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