STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBG_2083Conserved hypothetical protein; Sequence similarity extends further upstream for these two CDS but the only suitable translational start site for S. bongori would incorporate a stop codon into the sequence. Consequently it is possible that this CDS is a pseudogene. (180 aa)    
Predicted Functional Partners:
macA_3
HlyD-family secretion protein.
      
 0.830
yhjS
Conserved hypothetical protein.
  
     0.761
sulA
Cell division inhibitor; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.
  
     0.744
bscC
Cellulose biosynthesis protein subunit C.
  
     0.735
SBG_3168
Putative membrane protein.
  
     0.732
yfaY
Conserved hypothetical protein; Belongs to the CinA family.
 
     0.714
yhjU
Putative membrane protein.
  
     0.708
osmB
Osmotically inducible lipoprotein B precursor.
  
     0.693
nudI
Conserved hypothetical protein; Catalyzes the hydrolysis of nucleoside triphosphates, with a preference for pyrimidine deoxynucleoside triphosphates (dUTP, dTTP and dCTP); Belongs to the Nudix hydrolase family. NudI subfamily.
 
     0.690
malM
Maltose operon periplasmic protein.
  
     0.678
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.