STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBG_2129Putative sugar phosphotransferase component II B. (90 aa)    
Predicted Functional Partners:
ulaA_1
Putative membrane protein.
 
 
 0.989
ulaC_1
Putative sugar phosphotransferase component II A.
 
 
  0.981
ulaA_2
Putative membrane permease.
 
 
 0.964
ulaA_3
Putative PTS transport protein, component II.
 
 
 0.959
cmtB_2
PTS-family membrane transport protein, component IICD.
 
 
  0.958
sgaA
Putative sugar phosphotransferase.
 
 
  0.957
sgaT
Putative transport protein SgaT.
 
 
 0.954
sgaB
Putative PTS system IIB protein.
  
  
  0.912
ulaB_1
PTS-family membrane transport protein, component IIB.
  
  
 
0.907
yjfR
Conserved hypothetical protein.
  
 
 0.905
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.