STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfcGPutative glutathione-S transferase. (215 aa)    
Predicted Functional Partners:
sspA
Stringent starvation protein A; Belongs to the GST superfamily.
  
   
 0.608
SBG_2871
Conserved hypothetical protein.
  
  
 0.605
yfcF
Putative glutathione-S transferase.
  
  
 0.597
gst
Glutathione S-transferase; Belongs to the GST superfamily.
  
  
 0.578
rpoA
DNA-directed RNA polymerase alpha chain.
   
 
 0.574
ybhP
Conserved hypothetical protein.
   
    0.539
SBG_2136
Conserved hypothetical protein.
       0.534
ydhF
Putative oxidoreductase.
      
 0.468
SBG_1663
Conserved hypothetical protein.
   
    0.448
rpoZ
DNA-directed RNA polymerase omega chain; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
   0.435
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.