STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sbcF3Fimbrial subunit. (167 aa)    
Predicted Functional Partners:
sbcF2
Fimbrial subunit.
      
0.773
sbcF1
Fimbrial subunit.
       0.746
sbcE
Fimbrial protein.
       0.746
sbfD
Exported protein; No significant database hits.
       0.721
sbfC
Fimbrial chaperone protein.
       0.721
sbfB
Fimbrial outer membrane usher protein.
       0.721
sbcF4
Fimbrial subunit.
      
0.701
sbcG
Transposase (pseudogene); CDS appears to lack the 3' region.
       0.696
sbcA
Fimbrial protein.
       0.527
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.