Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sbfDExported protein; No significant database hits. (354 aa)    
Predicted Functional Partners:
sbfC
Fimbrial chaperone protein.
       0.773
sbfB
Fimbrial outer membrane usher protein.
       0.773
sbcF1
Fimbrial subunit.
       0.746
sbcE
Fimbrial protein.
       0.746
sbcF3
Fimbrial subunit.
       0.721
sbcF2
Fimbrial subunit.
       0.721
sbcF4
Fimbrial subunit.
       0.654
sbcG
Transposase (pseudogene); CDS appears to lack the 3' region.
       0.650
sbcA
Fimbrial protein.
       0.563
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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