STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBG_2212Putative membrane protein. (411 aa)    
Predicted Functional Partners:
SBOV07181_1
Putative pectin esterase precursor.
  
     0.716
SBG_1437
Putative transferase.
  
     0.709
yjjQ
Conserved hypothetical regulatory protein.
  
    0.697
zraP
Putative exported protein; Binds zinc. Could be an important component of the zinc- balancing mechanism; Belongs to the ZraP family.
  
     0.673
aphA
Class B acid phosphatase precursor; Belongs to the class B bacterial acid phosphatase family.
  
     0.643
csgB
Nucleation component of curlin monomers.
 
     0.606
yjcO
Putative exported protein.
  
    0.606
SBG_0513
Conserved hypothetical protein.
  
     0.595
yhjS
Conserved hypothetical protein.
  
     0.559
yadI
Putative PTS system IIA component.
  
    0.550
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.