STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ypfNPutative membrane protein. (66 aa)    
Predicted Functional Partners:
yfgD
Putative arsenate reductase (arsenical pump modifier); Belongs to the ArsC family.
     
 0.885
yfhB
Putative membrane protein.
  
     0.774
SBG_2706
Conserved hypothetical protein.
  
     0.773
yhfK
Conserved membrane protein.
  
     0.772
yacC
Conserved hypothetical protein.
  
     0.771
ygaC
Conserved hypothetical protein.
  
     0.771
secM
Secretion monitor precursor; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
     0.770
SBOV13191
Putative membrane protein.
  
     0.770
yiaF
Conserved hypothetical protein.
  
     0.770
SBG_2980
Conserved hypothetical protein.
  
     0.769
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.