STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pssACDP-diacylglycerol-serine O-phosphatidyltransferase. (451 aa)    
Predicted Functional Partners:
pgsA
Phosphotidylglycerophosphate synthetase; This protein catalyzes the committed step to the synthesis of the acidic phospholipids; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.946
cdsA
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
     
 0.928
psd
Phosphatidylserine decarboxylase proenzyme; Belongs to the phosphatidylserine decarboxylase family.
  
 0.928
glyA
Serine hydroxymethyltransferase.
     
 0.919
cdh
CDP-diglyceride hydrolase.
  
  
  0.911
cdsA_1
Putative transferase; Belongs to the CDS family.
     
  0.900
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
    
  0.900
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
  0.900
sdaA
L-serine deaminase 1; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
  0.900
sdaC2
Putative L-serine dehydratase.
     
  0.900
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.