Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
csiD_1 | tctA | SBG_2414 | SBG_2413 | Gab protein homolog. | Tricarboxylic transport. | 0.910 |
csiD_1 | tctB | SBG_2414 | SBG_2412 | Gab protein homolog. | Tricarboxylic transport. | 0.913 |
csiD_1 | tctC | SBG_2414 | SBG_2411 | Gab protein homolog. | Tricarboxylic transport. | 0.910 |
csiD_1 | tctE | SBG_2414 | SBG_2409 | Gab protein homolog. | Putative two-component system sensor kinase. | 0.702 |
tctA | csiD_1 | SBG_2413 | SBG_2414 | Tricarboxylic transport. | Gab protein homolog. | 0.910 |
tctA | tctB | SBG_2413 | SBG_2412 | Tricarboxylic transport. | Tricarboxylic transport. | 0.997 |
tctA | tctC | SBG_2413 | SBG_2411 | Tricarboxylic transport. | Tricarboxylic transport. | 0.997 |
tctA | tctD | SBG_2413 | SBG_2410 | Tricarboxylic transport. | Transcriptional regulator. | 0.512 |
tctA | tctE | SBG_2413 | SBG_2409 | Tricarboxylic transport. | Putative two-component system sensor kinase. | 0.814 |
tctB | csiD_1 | SBG_2412 | SBG_2414 | Tricarboxylic transport. | Gab protein homolog. | 0.913 |
tctB | tctA | SBG_2412 | SBG_2413 | Tricarboxylic transport. | Tricarboxylic transport. | 0.997 |
tctB | tctC | SBG_2412 | SBG_2411 | Tricarboxylic transport. | Tricarboxylic transport. | 0.997 |
tctB | tctD | SBG_2412 | SBG_2410 | Tricarboxylic transport. | Transcriptional regulator. | 0.668 |
tctB | tctE | SBG_2412 | SBG_2409 | Tricarboxylic transport. | Putative two-component system sensor kinase. | 0.925 |
tctC | csiD_1 | SBG_2411 | SBG_2414 | Tricarboxylic transport. | Gab protein homolog. | 0.910 |
tctC | tctA | SBG_2411 | SBG_2413 | Tricarboxylic transport. | Tricarboxylic transport. | 0.997 |
tctC | tctB | SBG_2411 | SBG_2412 | Tricarboxylic transport. | Tricarboxylic transport. | 0.997 |
tctC | tctD | SBG_2411 | SBG_2410 | Tricarboxylic transport. | Transcriptional regulator. | 0.641 |
tctC | tctE | SBG_2411 | SBG_2409 | Tricarboxylic transport. | Putative two-component system sensor kinase. | 0.891 |
tctD | tctA | SBG_2410 | SBG_2413 | Transcriptional regulator. | Tricarboxylic transport. | 0.512 |
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