STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srlAPTS system, glucitol/sorbitol-specific IIBC component. (187 aa)    
Predicted Functional Partners:
srlE
PTS system, glucitol/sorbitol-specific IIBC component.
 
 0.999
srlB
PTS system, glucitol/sorbitol-specific IIA component.
 
 
 0.999
srlD
Sorbitol-6-phosphate 2-dehydrogenase (glucitol-6-phosphate dehydrogenase); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
  0.999
gutM
Glucitol operon activator protein.
 
  
 0.966
gutB_1
Putative oxidoreductase.
 
  
  0.930
ptsH
Phosphocarrier protein HPr.
    
  0.902
gatB
PTS system, galactitol-specific IIB component.
  
     0.720
gatC
PTS system, galactitol-specific IIC component.
 
   
 0.714
gatA
PTS system, galactitol-specific IIA component.
 
    0.702
gatB_2
Putative phosphotransferase enzyme.
  
     0.698
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.