STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
barASensor protein BarA (pseudogene); 2 probable transmembrane helices predicted for SBG2573 by TMHMM2.0 at aa 10-32 and 177-199; Belongs to the glycerate kinase type-1 family. (380 aa)    
Predicted Functional Partners:
garR
2-hydroxy-3-oxopropionate reductase; Catalyzes the reduction of tatronate semialdehyde to D- glycerate; Belongs to the HIBADH-related family. 2-hydroxy-3- oxopropionate reductase subfamily.
  
 
 0.933
pmgI_1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.906
yiaE
Putative 2-hydroxyacid dehydrogenase; Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. GhrB subfamily.
    
 0.905
glxK_1
Conserved hypothetical protein.
  
 
 
0.904
glxK_3
Conserved hypothetical protein; Belongs to the glycerate kinase type-1 family.
  
  
 
0.903
gpmA
ABC transporter, membrane permease (pseudogene); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
     
 0.900
ghrA_2
Putative 2-hydroxyacid dehydrogenase in phoh-csgg intergenic region.
    
  0.900
gpmB
Putative phosphoglycerate mutase 2.
     
 0.900
ygcY
Putative glucarate dehydratase 2.
     
 0.772
ygcX
Putative glucarate dehydratase 1.
  
  
 0.767
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.