STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ygfYConserved hypothetical protein. (88 aa)    
Predicted Functional Partners:
SBG_2640
Conserved hypothetical protein.
  
  
 0.845
sdhA
Succinate dehydrogenase flavoprotein subunit.
 
 
 0.716
zipA_2
Cell division protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.712
frdA
Fumarate reductase, flavoprotein subunit.
  
 
 0.701
ifcA
Conserved hypothetical protein.
  
 
 0.670
sdhC
Succinate dehydrogenase cytochrome b-556 subunit.
 
   
 0.662
SBG_1137
Conserved hypothetical protein.
  
     0.654
sohB_2
Putative protease.
  
     0.617
ygfZ_1
Conserved hypothetical protein.
 
     0.611
sdhD
Succinate dehydrogenase hydrophobic membrane anchor protein.
 
     0.598
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.