Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| gcvH | gcvP | SBG_2647 | SBG_2646 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family. | 0.999 |
| gcvH | gcvT | SBG_2647 | SBG_2648 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Aminomethyltransferase; Belongs to the GcvT family. | 0.999 |
| gcvH | gltB | SBG_2647 | SBG_2960 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glutamate synthase [NADPH] large chain precursor. | 0.904 |
| gcvH | glyA | SBG_2647 | SBG_2329 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Serine hydroxymethyltransferase. | 0.968 |
| gcvH | lipA | SBG_2647 | SBG_0541 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.926 |
| gcvH | lipB | SBG_2647 | SBG_0543 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Lipoate-protein ligase B (lipoate biosynthesis protein B); Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.893 |
| gcvH | lpdA | SBG_2647 | SBG_0149 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Dihydrolipoamide dehydrogenase. | 0.969 |
| gcvH | lplA | SBG_2647 | SBG_3983 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Lipoate-protein ligase A; Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl onto the lipoyl domains of lipoate-dependent enzymes. | 0.964 |
| gcvH | putA | SBG_2647 | SBG_0967 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Proline dehydrogenase (proline oxidase); Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.948 |
| gcvH | sucA | SBG_2647 | SBG_0630 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 2-oxoglutarate dehydrogenase E1 component. | 0.880 |
| gcvP | gcvH | SBG_2646 | SBG_2647 | Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.999 |
| gcvP | gcvT | SBG_2646 | SBG_2648 | Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family. | Aminomethyltransferase; Belongs to the GcvT family. | 0.999 |
| gcvP | gltB | SBG_2646 | SBG_2960 | Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family. | Glutamate synthase [NADPH] large chain precursor. | 0.992 |
| gcvP | glyA | SBG_2646 | SBG_2329 | Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family. | Serine hydroxymethyltransferase. | 0.996 |
| gcvP | lipA | SBG_2646 | SBG_0541 | Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.565 |
| gcvP | lipB | SBG_2646 | SBG_0543 | Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family. | Lipoate-protein ligase B (lipoate biosynthesis protein B); Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.668 |
| gcvP | lpdA | SBG_2646 | SBG_0149 | Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family. | Dihydrolipoamide dehydrogenase. | 0.951 |
| gcvP | putA | SBG_2646 | SBG_0967 | Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family. | Proline dehydrogenase (proline oxidase); Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.825 |
| gcvP | sucA | SBG_2646 | SBG_0630 | Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family. | 2-oxoglutarate dehydrogenase E1 component. | 0.822 |
| gcvT | gcvH | SBG_2648 | SBG_2647 | Aminomethyltransferase; Belongs to the GcvT family. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.999 |
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