STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hybAHydrogenase-2 small subunit. (328 aa)    
Predicted Functional Partners:
hybB
Putative hydrogenase-2 cytochrome b subunit.
 
 0.998
hyb0
Hydrogenase-2 small chain protein.
 
  
 0.982
hybC
Hydrogenase-2 large subunit.
 
  
 0.973
hybE
Hydrogenase-2 component protein.
 
    0.948
hybD
Hydrogenase-2 component protein.
 
  
 0.941
hybF
Hydrogenase-2 component protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
  
    0.870
hybG
Putative ABC-transport protein,periplasmic-binding component (pseudogene); Hydrogenase-2 biosynthetic operon.
  
  
 0.730
fdoI
Formate dehydrogenase-O gamma subunit.
 
 
 0.700
ttrA
Tetrathionate reductase subunit A.
  
   0.601
fdnI
Formate dehydrogenase, nitrate-inducible,cytochrome b556.
 
 
 0.595
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.