mdaB protein (Salmonella bongori) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

mdaB

Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB. (193 aa)

Predicted Functional Partners:

ygiN

0.855

kefB

0.766

kefC

0.761

ybdL

0.557

SBG_2117

0.557

ygiX_2

0.517

qseC

0.517

SBOV39431_2

0.488

ygiW_1

0.469

lysA

0.461

Your Current Organism:

Salmonella bongori

NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SBG_2117	mdaB	SBG_2117	SBG_2772	Putative aminotransferase.	Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB.	0.557
SBOV39431_2	mdaB	SBG_3402	SBG_2772	Conserved hypothetical protein.	Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB.	0.488
kefB	kefC	SBG_3066	SBG_0074	Glutathione-regulated potassium-efflux system protein (K(+)/H(+)antiporter); Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.	Glutathione-regulated potassium-efflux system protein KefC; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.	0.474
kefB	mdaB	SBG_3066	SBG_2772	Glutathione-regulated potassium-efflux system protein (K(+)/H(+)antiporter); Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.	Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB.	0.766
kefC	kefB	SBG_0074	SBG_3066	Glutathione-regulated potassium-efflux system protein KefC; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.	Glutathione-regulated potassium-efflux system protein (K(+)/H(+)antiporter); Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.	0.474
kefC	mdaB	SBG_0074	SBG_2772	Glutathione-regulated potassium-efflux system protein KefC; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.	Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB.	0.761
lysA	mdaB	SBG_2618	SBG_2772	Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB.	0.461
mdaB	SBG_2117	SBG_2772	SBG_2117	Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB.	Putative aminotransferase.	0.557
mdaB	SBOV39431_2	SBG_2772	SBG_3402	Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB.	Conserved hypothetical protein.	0.488
mdaB	kefB	SBG_2772	SBG_3066	Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB.	Glutathione-regulated potassium-efflux system protein (K(+)/H(+)antiporter); Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.	0.766
mdaB	kefC	SBG_2772	SBG_0074	Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB.	Glutathione-regulated potassium-efflux system protein KefC; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.	0.761
mdaB	lysA	SBG_2772	SBG_2618	Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB.	Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.461
mdaB	qseC	SBG_2772	SBG_2771	Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB.	Putative two-component system sensor histidine kinase.	0.517
mdaB	ybdL	SBG_2772	SBG_0511	Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB.	Putative aminotransferase.	0.557
mdaB	ygiN	SBG_2772	SBG_2773	Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB.	Conserved hypothetical protein.	0.855
mdaB	ygiW_1	SBG_2772	SBG_2769	Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB.	Putative exported protein.	0.469
mdaB	ygiX_2	SBG_2772	SBG_2770	Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB.	Putative two-component system response regulator.	0.517
qseC	mdaB	SBG_2771	SBG_2772	Putative two-component system sensor histidine kinase.	Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB.	0.517
qseC	ygiN	SBG_2771	SBG_2773	Putative two-component system sensor histidine kinase.	Conserved hypothetical protein.	0.457
qseC	ygiW_1	SBG_2771	SBG_2769	Putative two-component system sensor histidine kinase.	Putative exported protein.	0.750

page 1 of 2

Server load: low (20%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About