STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Orf38Orf38; Phage tail protein. (176 aa)    
Predicted Functional Partners:
SBG_2818
Phage tail protein.
 
  
 0.984
gpL
Baseplate assembly protein.
 
 
 0.983
gpM
Baseplate assembly protein.
 
 
 0.983
SBG_2825
Phage tail protein.
 
 
 0.977
gp21
Bacteriophage major tail sheath protein FI.
 
 
 0.976
gp19
Phage variable tail-fibre protein; Also gpH.
 
  
 0.974
gp22
Putative major tail sheath protein FII.
 
 
 0.968
gpN
Putative phage tail completion protein.
 
    0.960
gpQ
Putative capsid completion protein.
 
    0.960
gpS
Tail completion protein S.
 
    0.959
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.