STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBG_2823Phage lysozyme gene. (165 aa)    
Predicted Functional Partners:
gpN
Putative phage tail completion protein.
 
     0.905
gpQ
Putative capsid completion protein.
 
     0.901
gpS
Tail completion protein S.
 
     0.852
SBG_2825
Phage tail protein.
 
     0.830
SBG_2824
Putative phage holin protein.
       0.792
gpR
Terminase, endonuclease subunit.
 
     0.790
SBG_2822
Lysozyme.
       0.788
SBG_2821A
Lysozyme.
       0.783
gpG
Phage tail tape measure protein.
 
     0.735
SBG_3390
Hypothetical protein.
 
     0.729
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.