Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SBG_0917 | exuT_1 | SBG_0917 | SBG_2863 | Conserved hypothetical phage protein; The Pfam KilA motif thought to define a conserved nucleotide binding domain. | Hexuronate transporter protein; Also exuT. | 0.508 |
| SBG_0917 | holD | SBG_0917 | SBG_3968 | Conserved hypothetical phage protein; The Pfam KilA motif thought to define a conserved nucleotide binding domain. | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | 0.481 |
| SBG_0917 | yicH | SBG_0917 | SBG_3328 | Conserved hypothetical phage protein; The Pfam KilA motif thought to define a conserved nucleotide binding domain. | Putative exported protein. | 0.477 |
| SBG_3856 | exuT_1 | SBG_3856 | SBG_2863 | Putative sugar transporter. | Hexuronate transporter protein; Also exuT. | 0.571 |
| exuR | exuT_1 | SBG_2864 | SBG_2863 | Exu regulon transcriptional regulator. | Hexuronate transporter protein; Also exuT. | 0.808 |
| exuT_1 | SBG_0917 | SBG_2863 | SBG_0917 | Hexuronate transporter protein; Also exuT. | Conserved hypothetical phage protein; The Pfam KilA motif thought to define a conserved nucleotide binding domain. | 0.508 |
| exuT_1 | SBG_3856 | SBG_2863 | SBG_3856 | Hexuronate transporter protein; Also exuT. | Putative sugar transporter. | 0.571 |
| exuT_1 | exuR | SBG_2863 | SBG_2864 | Hexuronate transporter protein; Also exuT. | Exu regulon transcriptional regulator. | 0.808 |
| exuT_1 | holD | SBG_2863 | SBG_3968 | Hexuronate transporter protein; Also exuT. | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | 0.474 |
| exuT_1 | rhaT | SBG_2863 | SBG_3563 | Hexuronate transporter protein; Also exuT. | L rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. | 0.446 |
| exuT_1 | yicH | SBG_2863 | SBG_3328 | Hexuronate transporter protein; Also exuT. | Putative exported protein. | 0.425 |
| holD | SBG_0917 | SBG_3968 | SBG_0917 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Conserved hypothetical phage protein; The Pfam KilA motif thought to define a conserved nucleotide binding domain. | 0.481 |
| holD | exuT_1 | SBG_3968 | SBG_2863 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Hexuronate transporter protein; Also exuT. | 0.474 |
| holD | yicH | SBG_3968 | SBG_3328 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Putative exported protein. | 0.730 |
| rhaT | exuT_1 | SBG_3563 | SBG_2863 | L rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. | Hexuronate transporter protein; Also exuT. | 0.446 |
| yicH | SBG_0917 | SBG_3328 | SBG_0917 | Putative exported protein. | Conserved hypothetical phage protein; The Pfam KilA motif thought to define a conserved nucleotide binding domain. | 0.477 |
| yicH | exuT_1 | SBG_3328 | SBG_2863 | Putative exported protein. | Hexuronate transporter protein; Also exuT. | 0.425 |
| yicH | holD | SBG_3328 | SBG_3968 | Putative exported protein. | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | 0.730 |