STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exuRExu regulon transcriptional regulator. (258 aa)    
Predicted Functional Partners:
exuT_1
Hexuronate transporter protein; Also exuT.
 
   
 0.808
lutR
Putative GntR-family transcriptional regulator; Transcriptional repressor that controls expression of the genes required for the catabolism of sialic acids.
  
     0.743
pdhR_4
Hypothetical 20.8 kDa protein in rbsr-rrsc intergenic region; Putative GntR-family transcriptional regulator.
  
     0.691
kdgR
Transcriptional regulator KdgR.
  
  
 0.562
nadR
Conserved hypothetical transcriptional regulator.
   
    0.533
ydfH_1
Putative regulatory protein.
  
  
 0.512
yqjA_2
Putative membrane protein.
     
 0.511
mzrA
Putative exported protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
       0.481
exuT_3
Putative sugar transporter.
  
   
 0.479
yegW_1
Putative gntR-family transcriptional regulator.
  
    0.412
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.