STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBG_2869Conserved hypothetical protein. (99 aa)    
Predicted Functional Partners:
elaB_1
Conserved hypothetical protein.
 
    0.894
osmE
Osmotically inducible lipoprotein E precursor.
  
    0.781
mzrA
Putative exported protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
 
     0.781
ompX
Outer membrane protein X precursor.
  
     0.774
SBG_1710
Putative exported protein.
  
     0.772
yecF
Conserved hypothetical protein.
  
     0.770
yqjC
Putative exported protein.
 
    0.770
ygdR_1
Putative lipoprotein.
  
     0.769
SBG_3371
Putative lipoprotein.
  
     0.769
atpI
ATP synthase protein I.
  
     0.767
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.