STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yedYConserved hypothetical protein. (334 aa)    
Predicted Functional Partners:
yedZ_1
Putative membrane protein.
 
  
 0.995
yeaA
Conserved hypothetical protein; Belongs to the MsrB Met sulfoxide reductase family.
  
  
 0.815
yjfM
Conserved hypothetical protein.
  
   
 0.761
dmsC2
Putative dimethyl sulphoxide reductase subunit.
      
 0.632
bisC
Biotin sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
      
 0.621
yhdH
Putative oxidoreductase.
     
 0.582
moaE
Molybdopterin converting factor, subunit 2.
 
   
 0.551
hiuH
Putative exported protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
  
   0.549
moeA
Molybdopterin biosynthesis MoeA protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
 
 
 0.526
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.472
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.