STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zntRPutative Zn(II)-responsive regulator. (141 aa)    
Predicted Functional Partners:
yhdN
Conserved hypothetical protein.
  
  
 0.934
zntA
Heavy metal-transporting ATPase.
 
  
 0.909
zitB
Zinc transporter.
     
 0.851
yiiP
Putative transmembrane efflux protein; Cation-efflux transporter that may have a role in detoxification.
     
 0.633
rpoA
DNA-directed RNA polymerase alpha chain.
   
 
 0.585
arcB
Aerobic respiration control sensor protein.
   
 
 0.533
SBG_0720
Transcriptional regulator (iron dependant repressor family).
      
 0.521
rplQ
50S ribosomal subunit protein L17; Belongs to the bacterial ribosomal protein bL17 family.
       0.513
porB
Putative pyruvate-flavodoxin oxidoreductase.
   
 
 0.491
cph2
Exported protein; The PFAM motifs to PF03707 MHYT, Bacterial signalling protein N terminal repeats.
    
 
 0.478
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.