STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhgEPutative membrane protein. (567 aa)    
Predicted Functional Partners:
SBG_3705
Large repetitive protein; The product of this CDS is composed of multiple degenerate repeats; note similarity to SBG3755 29.701% identity in 3313 aa overlap.
  
   
 0.948
SBOV46981
Conserved hypothetical protein.
  
     0.772
slrP
Leucine-rich repeat protein SlrP.
  
   
 0.769
yjfM
Conserved hypothetical protein.
  
     0.765
cld
Polysaccharide chain length regulator.
  
     0.744
csiE
Stationary phase inducible protein CsiE.
  
     0.744
yjfK
Conserved hypothetical protein.
  
     0.730
torD
TorD protein; Also significantly similar to SBG2023 30% identity in 190 aa overlap.
  
     0.717
SBG_2677
Putative membrane protein.
  
    0.713
sthA
Putative fimbrial protein.
  
    0.712
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.